PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS62866.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 101aa    MW: 11380.2 Da    PI: 10.0181
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS62866.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.4e-102472355
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  EPS62866.1 24 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 72
                58*************************9....556*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.09E-181890IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.10E-101976No hitNo description
PROSITE profilePS5088815.4852171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.4E-182188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-72472IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.7E-102777IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
KSQGSDLPKE GYVHIRARRG QATNSHSLAE RVRREKISER MKFLQDLVPG CSKVTGKAVM  60
LDEIINYVQS LQRQVEFLSM KLAAVNSHMD LNIEGLLAKD V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070886.14e-59PREDICTED: transcription factor bHLH49-like isoform X1
RefseqXP_011070888.14e-59PREDICTED: transcription factor bHLH49-like isoform X1
RefseqXP_011070889.13e-59PREDICTED: transcription factor bHLH49-like isoform X2
SwissprotQ9CAA98e-60BH049_ARATH; Transcription factor bHLH49
TrEMBLS8CEH87e-70S8CEH8_9LAMI; Uncharacterized protein (Fragment)
STRINGPOPTR_0010s14600.12e-57(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40002142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.34e-61bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]